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Name: python3-steps | Distribution: Fedora Project |
Version: 3.6.0 | Vendor: Fedora Project |
Release: 12.fc37 | Build date: Sat Jul 23 00:48:37 2022 |
Group: Unspecified | Build host: buildvm-s390x-20.s390.fedoraproject.org |
Size: 7207025 | Source RPM: python-steps-3.6.0-12.fc37.src.rpm |
Packager: Fedora Project | |
Url: http://steps.sourceforge.net/ | |
Summary: STochastic Engine for Pathway Simulation |
STEPS is a package for exact stochastic simulation of reaction-diffusion systems in arbitrarily complex 3D geometries. Our core simulation algorithm is an implementation of Gillespie's SSA, extended to deal with diffusion of molecules over the elements of a 3D tetrahedral mesh. While it was mainly developed for simulating detailed models of neuronal signaling pathways in dendrites and around synapses, it is a general tool and can be used for studying any biochemical pathway in which spatial gradients and morphology are thought to play a role. STEPS also supports accurate and efficient computational of local membrane potentials on tetrahedral meshes, with the addition of voltage-gated channels and currents. Tight integration between the reaction-diffusion calculations and the tetrahedral mesh potentials allows detailed coupling between molecular activity and local electrical excitability. We have implemented STEPS as a set of Python modules, which means STEPS users can use Python scripts to control all aspects of setting up the model, generating a mesh, controlling the simulation and generating and analyzing output. The core computational routines are still implemented as C/C++ extension modules for maximal speed of execution. STEPS 3.0.0 and above provide early parallel solution for stochastic spatial reaction-diffusion and electric field simulation. Documentation can be found here: http://steps.sourceforge.net/manual/manual_index.html
GPLv2
* Fri Jul 22 2022 Fedora Release Engineering <releng@fedoraproject.org> 3.6.0-12 - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild * Sun Jul 10 2022 Ankur Sinha (Ankur Sinha Gmail) <sanjay.ankur@gmail.com> 3.6.0-11 - fix: correct macro * Tue Jul 05 2022 Mamoru TASAKA <mtasaka@fedoraproject.org> - 3.6.0-8 - Add more template funtion to match (bug 2046914) * Wed Jun 15 2022 Python Maint <python-maint@redhat.com> - 3.6.0-7 - Rebuilt for Python 3.11 * Fri Jan 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 3.6.0-6 - Rebuilt for https://fedoraproject.org/wiki/Fedora_36_Mass_Rebuild * Mon Oct 18 2021 Antonio Trande <sagitter@fedoraproject.org> - 3.6.0-5 - Rebuild for PETSc-3.16.0 * Sun Sep 05 2021 Benjamin A. Beasley <code@musicinmybrain.net> - 3.6.0-4 - Rebuild for gtest 1.11.0 * Fri Jul 23 2021 Fedora Release Engineering <releng@fedoraproject.org> - 3.6.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_35_Mass_Rebuild * Mon Jun 28 2021 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 3.6.0-2 - Fix requires * Sat Jun 26 2021 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 3.6.0-1 - Merge https://src.fedoraproject.org/rpms/python-steps/pull-request/2 manually - Release 3.6.0 - Update Patch2 - Use bundled cvode-2.6.0 (upstream bug #23) * Fri Jun 04 2021 Python Maint <python-maint@redhat.com> - 3.5.0-10 - Rebuilt for Python 3.10 * Mon May 17 2021 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 3.5.0-9 - Rebuild for sundials update * Wed Apr 21 2021 Ankur Sinha <ankursinha AT fedoraproject DOT org> - 3.5.0-8 - Rebuild for petsc update * Wed Jan 27 2021 Fedora Release Engineering <releng@fedoraproject.org> - 3.5.0-7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_34_Mass_Rebuild * Tue Oct 06 2020 Antonio Trande <sagitter@fedoraproject.org> - 3.5.0-6 - Rebuild for sundials-5.4.0 * Thu Aug 27 2020 Iñaki Úcar <iucar@fedoraproject.org> - 3.5.0-5 - https://fedoraproject.org/wiki/Changes/FlexiBLAS_as_BLAS/LAPACK_manager * Wed Jul 29 2020 Fedora Release Engineering <releng@fedoraproject.org> - 3.5.0-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_33_Mass_Rebuild
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