glimmer-3.02b-26.fc40 RPM for s390x

From Fedora Rawhide for s390x / g

Glimmer is a system for finding genes in microbial DNA, especially the genomes
of bacteria, archaea, and viruses. Glimmer (Gene Locator and Interpolated
Markov ModelER) uses interpolated Markov models (IMMs) to identify the coding
regions and distinguish them from noncoding DNA.

Provides

• glimmer
• glimmer(s390-64)

Requires

• /usr/bin/awk
• /usr/bin/csh
• elph
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.2)(64bit)
• libc.so.6(GLIBC_2.3.4)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.38)(64bit)
• libc.so.6(GLIBC_2.4)(64bit)
• libc.so.6(GLIBC_2.7)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libm.so.6()(64bit)
• libm.so.6(GLIBC_2.2)(64bit)
• libm.so.6(GLIBC_2.27)(64bit)
• libm.so.6(GLIBC_2.29)(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.8)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.32)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)

License

Artistic clarified

Changelog

* Wed Jan 24 2024 Fedora Release Engineering <releng@fedoraproject.org> - 3.02b-26
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Fri Jan 19 2024 Fedora Release Engineering <releng@fedoraproject.org> - 3.02b-25
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Wed Jul 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 3.02b-24
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild
* Thu Jan 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 3.02b-23
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 3.02b-22
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild

Files

/usr/bin/g3-from-scratch.csh
/usr/bin/g3-from-training.csh
/usr/bin/g3-iterated.csh
/usr/bin/glimmer3
/usr/lib/.build-id
/usr/lib/.build-id/20
/usr/lib/.build-id/20/a50d8d2c6ec97475f0aca9ea28fe3aef1a67de
/usr/lib/.build-id/33
/usr/lib/.build-id/33/c9203cc10a010d50c4b34c9e70995584e25fdc
/usr/lib/.build-id/36
/usr/lib/.build-id/36/60ea112981f4d4ee1bef1e6a03134c23f1637c
/usr/lib/.build-id/38
/usr/lib/.build-id/38/b3489a768c24eaa4ee830a7b285cc269606f06
/usr/lib/.build-id/94
/usr/lib/.build-id/94/bbf49977d373e1c2662df4493aabf1a1dc83d4
/usr/lib/.build-id/9b
/usr/lib/.build-id/9b/4a8a79b09f3f0275929f5869164859cde93981
/usr/lib/.build-id/b0
/usr/lib/.build-id/b0/882fa65860817fd3a062b9b74597e442ef5b82
/usr/lib/.build-id/ba
/usr/lib/.build-id/ba/3468c1ef670d504726c197ad0e5e31429c7fb6
/usr/lib/.build-id/c3
/usr/lib/.build-id/c3/508a3f6031aec2bc3e177d2bb77e03e9bab605
/usr/lib/.build-id/d7
/usr/lib/.build-id/d7/6880d5e677bfd4c60901d270a8341f41ec576d
/usr/lib/.build-id/e3
/usr/lib/.build-id/e3/2119289888c8d05b9f8809a4c73e235222d425
/usr/lib/.build-id/e9
/usr/lib/.build-id/e9/ebb6c57fdc1937e749cce22d4eeed22f406bd8
/usr/lib/.build-id/fb
/usr/lib/.build-id/fb/2c2a117382b9a118cd914bb0c73669d5d6a12b
/usr/libexec/glimmer3
/usr/libexec/glimmer3/anomaly
/usr/libexec/glimmer3/build-fixed
/usr/libexec/glimmer3/build-icm
/usr/libexec/glimmer3/entropy-profile
/usr/libexec/glimmer3/entropy-score
/usr/libexec/glimmer3/extract
/usr/libexec/glimmer3/glimmer3
/usr/libexec/glimmer3/long-orfs
/usr/libexec/glimmer3/multi-extract
/usr/libexec/glimmer3/score-fixed
/usr/libexec/glimmer3/start-codon-distrib
/usr/libexec/glimmer3/uncovered
/usr/libexec/glimmer3/window-acgt
/usr/share/doc/glimmer
/usr/share/doc/glimmer/LICENSE
/usr/share/doc/glimmer/glim302notes.pdf
/usr/share/doc/glimmer/sample-run
/usr/share/doc/glimmer/sample-run/from-scratch.detail
/usr/share/doc/glimmer/sample-run/from-scratch.icm
/usr/share/doc/glimmer/sample-run/from-scratch.longorfs
/usr/share/doc/glimmer/sample-run/from-scratch.predict
/usr/share/doc/glimmer/sample-run/from-scratch.train
/usr/share/doc/glimmer/sample-run/from-training.detail
/usr/share/doc/glimmer/sample-run/from-training.icm
/usr/share/doc/glimmer/sample-run/from-training.motif
/usr/share/doc/glimmer/sample-run/from-training.predict
/usr/share/doc/glimmer/sample-run/from-training.train
/usr/share/doc/glimmer/sample-run/from-training.upstream
/usr/share/doc/glimmer/sample-run/iterated.coords
/usr/share/doc/glimmer/sample-run/iterated.detail
/usr/share/doc/glimmer/sample-run/iterated.icm
/usr/share/doc/glimmer/sample-run/iterated.longorfs
/usr/share/doc/glimmer/sample-run/iterated.motif
/usr/share/doc/glimmer/sample-run/iterated.predict
/usr/share/doc/glimmer/sample-run/iterated.run1.detail
/usr/share/doc/glimmer/sample-run/iterated.run1.predict
/usr/share/doc/glimmer/sample-run/iterated.train
/usr/share/doc/glimmer/sample-run/iterated.upstream
/usr/share/doc/glimmer/sample-run/tpall.fna
/usr/share/doc/glimmer/sample-run/tpall.nh
/usr/share/glimmer3
/usr/share/glimmer3/get-motif-counts.awk
/usr/share/glimmer3/glim-diff.awk
/usr/share/glimmer3/match-list-col.awk
/usr/share/glimmer3/not-acgt.awk
/usr/share/glimmer3/upstream-coords.awk

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Fabrice Bellet, Wed May 1 02:28:23 2024