fastx_toolkit-0.0.14-34.fc40 RPM for ppc64le

From Fedora Rawhide for ppc64le / f

The FASTX-Toolkit is a collection of command line tools for
Short-Reads FASTA/FASTQ files preprocessing.

Next-Generation sequencing machines usually produce FASTA or FASTQ
files, containing multiple short-reads sequences (possibly with
quality information).

The main processing of such FASTA/FASTQ files is mapping (aka
aligning) the sequences to reference genomes or other databases using
specialized programs. Example of such mapping programs are: Blat,
SHRiMP, LastZ, MAQ and many many others.

However, It is sometimes more productive to preprocess the FASTA/FASTQ
files before mapping the sequences to the genome - manipulating the
sequences to produce better mapping results.

The FASTX-Toolkit tools perform some of these preprocessing tasks.

Provides

• fastx_toolkit
• fastx_toolkit(ppc-64)

Requires

• /usr/bin/bash
• /usr/bin/perl
• libc.so.6()(64bit)
• libc.so.6(GLIBC_2.17)(64bit)
• libc.so.6(GLIBC_2.32)(64bit)
• libc.so.6(GLIBC_2.34)(64bit)
• libc.so.6(GLIBC_2.38)(64bit)
• libc.so.6(GLIBC_ABI_DT_RELR)(64bit)
• libgcc_s.so.1()(64bit)
• libgcc_s.so.1(GCC_3.0)(64bit)
• libgcc_s.so.1(GCC_3.3.1)(64bit)
• libgtextutils-0.7.so.0()(64bit)
• libstdc++.so.6()(64bit)
• libstdc++.so.6(CXXABI_1.3)(64bit)
• libstdc++.so.6(CXXABI_1.3.5)(64bit)
• libstdc++.so.6(CXXABI_1.3.9)(64bit)
• libstdc++.so.6(GLIBCXX_3.4)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.11)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.15)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.18)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.20)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.21)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.29)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.30)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.32)(64bit)
• libstdc++.so.6(GLIBCXX_3.4.9)(64bit)
• perl(Carp)
• perl(Data::Dumper)
• perl(GD::Graph::bars)
• perl(Getopt::Long)
• perl(IO::Handle)
• perl(PerlIO::gzip)
• perl(strict)
• perl(warnings)
• perl-GDGraph
• perl-PerlIO-gzip
• rpmlib(CompressedFileNames) <= 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) <= 4.0-1
• rpmlib(PayloadIsZstd) <= 5.4.18-1
• rtld(GNU_HASH)
• sed

License

AGPLv3+

Changelog

* Wed Jan 24 2024 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-34
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Fri Jan 19 2024 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-33
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_40_Mass_Rebuild
* Wed Jul 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-32
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_39_Mass_Rebuild
* Thu Jan 19 2023 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-31
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_38_Mass_Rebuild
* Thu Jul 21 2022 Fedora Release Engineering <releng@fedoraproject.org> - 0.0.14-30
  - Rebuilt for https://fedoraproject.org/wiki/Fedora_37_Mass_Rebuild

Files

/usr/bin/fasta_clipping_histogram.pl
/usr/bin/fasta_formatter
/usr/bin/fasta_nucleotide_changer
/usr/bin/fastq_masker
/usr/bin/fastq_quality_boxplot_graph.sh
/usr/bin/fastq_quality_converter
/usr/bin/fastq_quality_filter
/usr/bin/fastq_quality_trimmer
/usr/bin/fastq_to_fasta
/usr/bin/fastx_artifacts_filter
/usr/bin/fastx_barcode_splitter.pl
/usr/bin/fastx_clipper
/usr/bin/fastx_collapser
/usr/bin/fastx_nucleotide_distribution_graph.sh
/usr/bin/fastx_nucleotide_distribution_line_graph.sh
/usr/bin/fastx_quality_stats
/usr/bin/fastx_renamer
/usr/bin/fastx_reverse_complement
/usr/bin/fastx_trimmer
/usr/bin/fastx_uncollapser
/usr/lib/.build-id
/usr/lib/.build-id/07
/usr/lib/.build-id/07/50ec638a487d30dfea9bcbe6b1e2709655cedd
/usr/lib/.build-id/14
/usr/lib/.build-id/14/e9a79733534b1a371d7737fd0b81a755148d58
/usr/lib/.build-id/38
/usr/lib/.build-id/38/306e69a233bde4bde7394feba2fbe24bdb5f4a
/usr/lib/.build-id/39
/usr/lib/.build-id/39/023718247a4a168d97264b73385d6bb3b7fb1d
/usr/lib/.build-id/4b
/usr/lib/.build-id/4b/2b019bb1b4c3c5b1fcad11c8f42302be398006
/usr/lib/.build-id/4c
/usr/lib/.build-id/4c/223a4812b63dfa337be48cc8402a87d2014370
/usr/lib/.build-id/52
/usr/lib/.build-id/52/a54ce1ac88d099c8da9bbb6c23cf4653670dfc
/usr/lib/.build-id/70
/usr/lib/.build-id/70/e87de6b8d4b866786a8748ecb56aa302f12c68
/usr/lib/.build-id/87
/usr/lib/.build-id/87/1a102f5df90d208b3282235f9e61b9c3ec1a9a
/usr/lib/.build-id/ad
/usr/lib/.build-id/ad/f1682e38317aeede2917fb86ec0026e373a446
/usr/lib/.build-id/c4
/usr/lib/.build-id/c4/5d0c66d1ee5bb51acf627b90752b427f47999e
/usr/lib/.build-id/df
/usr/lib/.build-id/df/92d9b95a6c57a2021199214742e6fad9047ad4
/usr/lib/.build-id/df/aa2d7f97195771ade30396004cb0e2b1a1acf4
/usr/lib/.build-id/e7
/usr/lib/.build-id/e7/6b0dd22a9a7d8c99e94661c203a3ed6ff847de
/usr/lib/.build-id/f5
/usr/lib/.build-id/f5/2e4d6bd543917c8d6a72bf427b982cbe7de951
/usr/share/doc/fastx_toolkit
/usr/share/doc/fastx_toolkit/AUTHORS
/usr/share/doc/fastx_toolkit/COPYING
/usr/share/doc/fastx_toolkit/NEWS
/usr/share/doc/fastx_toolkit/README
/usr/share/doc/fastx_toolkit/THANKS

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Fabrice Bellet, Fri May 3 01:25:35 2024