perl-TGICL-2.0-1 RPM for i386

From SourceForge / t / tg / tgicl / tgicl v2.0-1

Bioinformatics Tool for Clustering and assembling DNA sequence data. The data is expected in a fasta formated file according to NCBI fasta format standard. Both clustering and assembly can be parallelized using the PVM environment (Parallel Virtual Machine). Initial data and the resulting assembled contings can be optionally loaded into a database and some reports can be automatically generated as static HTML files. For the moment only Oracle and MySQL databases are supported.

Provides

• perl-TGICL
• perl(TGI::DBDrv)
• perl(TGI::DBDrv::Driver)
• perl(TGI::DBDrv::Driver::mysql)
• perl(TGI::DBDrv::Driver::oracle)
• perl(TGI::Exception)
• perl(TGI::Exception::IO)
• perl(TGI::Exception::IPC)
• perl(TGI::Mailer)
• perl(TGI::Util)
• perl-TGICL(x86-32)

Requires

• /usr/bin/perl >=
• libc.so.6
• libc.so.6(GLIBC_2.0) >
• libc.so.6(GLIBC_2.1) =
• libc.so.6(GLIBC_2.1.3)
• libc.so.6(GLIBC_2.2)
• libc.so.6(GLIBC_2.2.4)
• libc.so.6(GLIBC_2.3) <
• libm.so.6
• libm.so.6(GLIBC_2.1) <
• libz.so.1 <
• perl(DBI)
• perl(FindBin)
• perl(Getopt::Std)
• perl(IO::File)
• perl(POSIX)
• perl(TGI::DBDrv)
• perl(TGI::Exception)
• perl(TGI::Mailer)
• perl(TGI::Util)
• perl(base)
• perl(lib)
• perl(overload)
• perl(strict)
• rpmlib(CompressedFileNames) < 3.0.4-1
• rpmlib(FileDigests) <= 4.6.0-1
• rpmlib(PayloadFilesHavePrefix) > 4.0-1
• rpmlib(VersionedDependencies) > 3.0.3-1

License

Artistic

Changelog

* Fri Feb 19 2010 valentin@asterah
  - Initial build.

Files

/usr/local/bin
/usr/local/bin/aceconv
/usr/local/bin/cap3
/usr/local/bin/cdbfasta
/usr/local/bin/cdbyank
/usr/local/bin/formatdb
/usr/local/bin/mdust
/usr/local/bin/mgblast
/usr/local/bin/nrcl
/usr/local/bin/psx
/usr/local/bin/pvmsx
/usr/local/bin/sclust
/usr/local/bin/tclust
/usr/local/bin/tgicl
/usr/local/bin/tgicl_asm.psx
/usr/local/bin/tgicl_asmpta.psx
/usr/local/bin/tgicl_cluster.psx
/usr/local/bin/zmsort
/usr/local/lib/perl5/site_perl/5.10.0/TGI
/usr/local/lib/perl5/site_perl/5.10.0/TGI/DBDrv
/usr/local/lib/perl5/site_perl/5.10.0/TGI/DBDrv.pm
/usr/local/lib/perl5/site_perl/5.10.0/TGI/DBDrv/Driver
/usr/local/lib/perl5/site_perl/5.10.0/TGI/DBDrv/Driver.pm
/usr/local/lib/perl5/site_perl/5.10.0/TGI/DBDrv/Driver/mysql.pm
/usr/local/lib/perl5/site_perl/5.10.0/TGI/DBDrv/Driver/oracle.pm
/usr/local/lib/perl5/site_perl/5.10.0/TGI/Exception.pm
/usr/local/lib/perl5/site_perl/5.10.0/TGI/Mailer.pm
/usr/local/lib/perl5/site_perl/5.10.0/TGI/Util.pm
/usr/local/share
/usr/local/share/man
/usr/local/share/man/man1
/usr/local/share/man/man1/tgicl.1
/usr/local/share/man/man3
/usr/local/share/man/man3/TGI::DBDrv.3pm
/usr/local/share/man/man3/TGI::DBDrv::Driver.3pm
/usr/local/share/man/man3/TGI::DBDrv::Driver::mysql.3pm
/usr/local/share/man/man3/TGI::DBDrv::Driver::oracle.3pm
/usr/local/share/man/man3/TGI::Exception.3pm
/usr/local/share/man/man3/TGI::Mailer.3pm
/usr/local/share/man/man3/TGI::Util.3pm
/usr/share/doc/perl-TGICL-2.0
/usr/share/doc/perl-TGICL-2.0/Changes
/usr/share/doc/perl-TGICL-2.0/LICENSE
/usr/share/doc/perl-TGICL-2.0/README

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Fabrice Bellet, Tue May 21 23:05:17 2013